Table of Contents, Volume 8, 2010

January

George W. Graham and W. Alex M. Nimmo Smith
The application of holography to the analysis of size and settling velocity of suspended cohesive sediments
2010, 8:1-15
Abstract | PDF

Glenn Campbell and Stuart R. Phinn
An assessment of the accuracy and precision of water quality parameters retrieved with the Matrix Inversion Method
2010, 8:16-29
Abstract | PDF

Andrew B. Sutherland, Joseph M. Culp, and Glenn A. Benoy
Characterizing deposited sediment for stream habitat assessment
2010, 8:30-44
Abstract | PDF

February

Michael F. Billett and Mark H. Garnett
Isotopic composition of carbon dioxide lost by evasion from surface water to the atmosphere: Methodological comparison of a direct and indirect approach
2010, 8:45-53
Abstract | PDF

Matthew R. McIlvin and Karen L. Casciotti
Fully automated system for stable isotopic analyses of dissolved nitrous oxide at natural abundance levels
2010, 8:54-66
Abstract | PDF

Rose M. Cory, Matthew P. Miller, Diane M. McKnight, Jennifer J. Guerard, and Penney L. Miller
Effect of instrument-specific response on the analysis of fulvic acid fluorescence spectra
2010, 8:67-78
Abstract | PDF (Open Access)

March

John H. Chick, Alex P. Levchuk, Kim A. Medley, and John H. Havel
Underestimation of rotifer abundance a much greater problem than previously appreciated
2010, 8:79-87
Abstract | PDF (Open Access)

D. Lirman, N. Gracias, B. Gintert, A. C. R. Gleason, G. Deangelo, M. Dick, E. Martinez, R. P. Reid
Damage and recovery assessment of vessel grounding injuries on coral reef habitats by use of georeferenced landscape video mosaics
2010, 8:88-97
Abstract | PDF

Daniel F. Carlson, Philip A. Muscarella, Hezi Gildor, Bruce L. Lipphardt, Jr., and Erick Fredj
How useful are progressive vector diagrams for studying coastal ocean transport?
2010, 8:98-106
Abstract | PDF

Karl D. Castillo and Fernando P. Lima
Comparison of in situ and satellite-derived (MODIS-Aqua/Terra) methods for assessing temperatures on coral reefs
2010, 8:107-117
Abstract | PDF

April

Wim Kimmerer and Alison Gould
A Bayesian approach to estimating copepod development times from stage frequency data
2010, 8:118-126
Abstract | PDF

Carme Huguet, Willm Martens-Habbena, Hidetoshi Urakawa, David A. Stahl, and Anitra E. Ingalls
Comparison of extraction methods for quantitative analysis of core and intact polar glycerol dialkyl glycerol tetraethers (GDGTs) in environmental samples
2010, 8:127-145
Abstract | PDF

Elizabeth Halliday, John F. Griffith, and Rebecca J. Gast
Use of an exogenous plasmid standard and quantitative PCR to monitor spatial and temporal distribution of Enterococcus spp. in beach sands
2010, 8:146-154
Abstract | PDF

May

J. Schneider von Deimling, J. Greinert, N. R. Chapman, W. Rabbel, and P. Linke
Acoustic imaging of natural gas seepage in the North Sea: Sensing bubbles controlled by variable currents
2010, 8:155-171
Abstract | PDF (Open Access)

Todd R. Martz, James G. Connery, and Kenneth S. Johnson
Testing the Honeywell Durafet® for seawater pH applications
2010, 8:172-184
Abstract | PDF

Dan A. Exton, David J. Smith, Terry J. McGenity, Michael Steinke, Alan J. Hills, and David J. Suggett
Application of a Fast Isoprene Sensor (FIS) for measuring isoprene production from marine samples
2010, 8:185-195
Abstract | PDF

Stuart Findlay, William H. McDowell, David Fischer, Michael L. Pace, Nina Caraco, Sujay S Kaushal, and Kathleen C. Weathers
Total carbon analysis may overestimate organic carbon content of fresh waters in the presence of high dissolved inorganic carbon
2010, 8:196-201
Abstract | PDF

H. M. Baulch, J. J. Venkiteswaran, P. J. Dillon, and R. Maranger
Revisiting the application of open-channel estimates of denitrification
2010, 8:202-215
Abstract | PDF | Appendix 1 | Appendix 2 (Open Access)

Kristian Laß, Joscha Kleber, and Gernot Friedrichs
Vibrational sum-frequency generation as a probe for composition, chemical reactivity, and film formation dynamics of the sea surface nanolayer
2010, 8:216-228
Abstract | PDF

Frank Beuchel, Raul Primicerio, Ole Jørgen Lønne, Bjørn Gulliksen, and Sten-Richard Birkely
Counting and measuring epibenthic organisms from digital photographs: A semiautomated approach
2010, 8:229-240
Abstract | PDF (Open Access)

C. J. Veal, G. Holmes, M. Nunez, O. Hoegh-Guldberg, and J. Osborn
A comparative study of methods for surface area and threedimensional shape measurement of coral skeletons
2010, 8:241-253
Abstract | PDF

June

Jan P. Fischer and Frank Wenzhöfer
A novel planar optode setup for concurrent oxygen and light field imaging: Application to a benthic phototrophic community
2010, 8:254-268
Abstract | PDF

Mara R. Diaz, James W. Jacobson, Kelly D. Goodwin, Sherry A. Dunbar, and Jack W. Fell
Molecular detection of harmful algal blooms (HABs) using locked nucleic acids and bead array technology
2010, 8:269-284
Abstract | PDF

Jonathan J. Cole, Darren L. Bade, David Bastviken, Michael L. Pace, and Matthew Van de Bogert
Multiple approaches to estimating air-water gas exchange in small lakes
2010, 8:285-293
Abstract | PDF

Katharina Reichert, Karl Inne Ugland, Inka Bartsch, Joaquín Hortal, Julie Bremner and Alexandra Kraberg
Species richness estimation: Estimator performance and the influence of rare species
2010, 8:294-303
Abstract | PDF

Jean-Claude Caprais, Nadine Lanteri, Philippe Crassous, Philippe Noel, Laurent Bignon, Patrick Rousseaux, Patricia Pignet, and Alexis Khripounoff
A new CALMAR benthic chamber operating by submersible: First application in the cold-seep environment of Napoli mud volcano (Mediterranean Sea)
2010, 8:304-312
Abstract | PDF

Paul C. Fiedler
Comparison of objective descriptions of the thermocline
2010, 8:313-325
Abstract | PDF

July

Qingzhi Zhu and Robert C. Aller
A rapid response, planar fluorosensor for measuring twodimensional pCO2 distributions and dynamics in marine sediments
2010, 8:326-336
Abstract | PDF

Joshua A. Mackie and Jonathan Geller
Experimental parameters affecting quantitative PCR of Artemia franciscana: a model for a marine zooplanktonic target in natural plankton samples
2010, 8:337-347
Abstract | PDF

Erika G. Schielke and David M. Post
Size matters: comparing stable isotope ratios of tissue plugs and whole organisms
2010, 8:348-351
Abstract | PDF

Rachel U. Shelley, Bernhard Zachhuber, Peter N. Sedwick, Paul J. Worsfold, Maeve C. Lohan
Determination of total dissolved cobalt in UV-irradiated seawater using flow injection with chemiluminescence detection
2010, 8:352-362
Abstract | PDF

Charuleka Varadharajan, Richard Hermosillo, and Harold F. Hemond
A low-cost automated trap to measure bubbling gas fluxes
2010, 8:363-375
Abstract | PDF

August

Jacob Carstensen
Censored data regression: Statistical methods for analyzing Secchi transparency in shallow systems
2010, 8:376-385
Abstract | PDF

Helle Ploug, Anja Terbrüggen, Anna Kaufmann, Dieter Wolf-Gladrow, and Uta Passow
A novel method to measure particle sinking velocity in vitro, and its comparison to three other in vitro methods
2010, 8:386-393
Abstract | PDF (Open Access)

J. P. Ryan, S. B. Johnson, A. Sherman, K. Rajan, F. Py, H. Thomas, J. B. J. Harvey, L. Bird, J. D. Paduan, and R. C. Vrijenhoek
Mobile autonomous process sampling within coastal ocean observing systems
2010, 8:394-402
Abstract | PDF (Open Access)

Burt Thomas and Michael A. Arthur
Correcting porewater concentration measurements from peepers: Application of a reverse tracer
2010, 8:403-413
Abstract | PDF

Elena Gorokhova
A single-step staining method to evaluate egg viability in zooplankton
2010, 8:414-423
Abstract | PDF

Tom J. S. Cox, Karline Soetaert, Jean-Pierre Vanderborght, Jacco C. Kromkamp, and Patrick Meire
Modeling photosynthesis-irradiance curves: Effects of temperature, dissolved silica depletion, and changing community assemblage on community photosynthesis
2010, 8:424-440
Abstract | PDF

Nann A. Fangue, Michael J. O'Donnell, Mary A. Sewell, Paul G. Matson, Anna C. MacPherson, and Gretchen E. Hofmann
A laboratory-based, experimental system for the study of ocean acidification effects on marine invertebrate larvae
2010, 8:441-452
Abstract | PDF

September

Tamara Cibic and Damiano Virgilio
Different fixatives and chloridric acid concentrations in microphytobenthic primary production estimates using radiolabeled carbon: their use and misuse
2010, 8:453-461
Abstract | PDF

Marc Picheral, Lionel Guidi, Lars Stemmann, David M. Karl, Ghizlaine Iddaoud, and Gabriel Gorsky
The Underwater Vision Profiler 5: An advanced instrument for high spatial resolution studies of particle size spectra and zooplankton
2010, 8:462-473
Abstract | PDF

Pierre Sagnes
Using multiple scales to estimate the projected frontal surface area of complex three-dimensional shapes such as flexible freshwater macrophytes at different flow conditions
2010, 8:474-483
Abstract | PDF

Timothy P. Covino, Brian L. McGlynn, and Rebecca A. McNamara
Tracer Additions for Spiraling Curve Characterization (TASCC): Quantifying stream nutrient uptake kinetics from ambient to saturation
2010, 8:484-498
Abstract | PDF | Appendix

October

Ruth L. Airs and Steven D. Archer
Analysis of glycine betaine and choline in seawater particulates by liquid chromatography/electrospray ionization/mass spectrometry
2010, 8:499-506
Abstract | PDF

Stephen Andrews, Daniel Nover, and S. Geoffrey Schladow
Using laser diffraction data to obtain accurate particle size distributions: the role of particle composition
2010, 8:507-526
Abstract | PDF

Shai Sabbah, James M. Fraser, Emmanuel S. Boss, Itamar Blum, and Craig W. Hawryshyn
Hyperspectral portable beam transmissometer for the ultraviolet-visible spectrum
2010, 8:527-538
Abstract | PDF

Gernot Friedrichs, Julia Bock, Friedrich Temps, Peer Fietzek, Arne Körtzinger, and Douglas W. R. Wallace
Toward continuous monitoring of seawater 13CO2/12CO2 isotope ratio and pCO2: Performance of cavity ringdown spectroscopy and gas matrix effects
2010, 8:539-551
Abstract | PDF

Natalie Kim and Norman D. Yan
Methods for rearing the invasive zooplankter Bythotrephes in the laboratory
2010, 8:552-561
Abstract | PDF

Pamela Vaughan, Avery Bullock, Fabien Joux, and Wade H. Jeffrey
The effects of solar radiation on the stability of 3H-thymidine and 3H-leucine during bacterioplankton production measurements
2010, 8:562-566
Abstract | PDF

November

Bertram Boehrer, Peter Herzsprung, Martin Schultze, and Frank. J. Millero
Calculating density of water in geochemical lake stratification models
2010, 8:567-574
Abstract | PDF | Appendix

Bahareh Doroudian, Fereshteh Bagherimiyab, and Ulrich Lemmin
Improving the accuracy of four-receiver acoustic Doppler velocimeter (ADV) measurements in turbulent boundary layer flows
2010, 8:575-591
Abstract | PDF

Katey M. Walter Anthony, Dragos. A. Vas, Laura Brosius, F. Stuart Chapin III, Sergey A. Zimov, and Qianlai Zhuang
Estimating methane emissions from northern lakes using ice-bubble surveys
2010, 8:592-609
Abstract | PDF (Open Access)

Lee D. Bryant, Daniel F. McGinnis, Claudia Lorrai, Andreas Brand, John C. Little, Alfred Wüest
Evaluating oxygen fluxes using microprofiles from both sides of the sediment-water interface
2010, 8:610-627
Abstract | PDF

Peter A. Staehr, Darren Bade, Matthew C. Van de Bogert, Gregory R. Koch, Craig Williamson, Paul Hanson, Jonathan J. Cole, and Tim Kratz
Lake metabolism and the diel oxygen technique: State of the science
2010, 8:628-644
Abstract | PDF (Open Access)

Jenny Q. Lane, C. Meiling Roddam, Gregg W. Langlois, and Raphael M. Kudela
Application of Solid Phase Adsorption Toxin Tracking (SPATT) for field detection of the hydrophilic phycotoxins domoic acid and saxitoxin in coastal California
2010, 8:645-660
Abstract | PDF

December

James T. Waples and Kent A. Orlandini
A method for the sequential measurement of yttrium-90 and thorium-234 and their application to the study of rapid particle dynamics in aquatic systems
2010, 8:661-677
Abstract | PDF (Open Access)

Robert C. Grabowski, Ian G. Droppo, and Geraldene Wharton
Estimation of critical shear stress from cohesive strength meter-derived erosion thresholds
2010, 8:678-685
Abstract | PDF

Christina M. McGraw, Christopher E. Cornwall, Malcolm R. Reid, Kim I. Currie, Christopher D. Hepburn, Philip Boyd, Catriona L. Hurd, and Keith A. Hunter
An automated pH-controlled culture system for laboratory-based ocean acidification experiments
2010, 8:686-694
Abstract | PDF

Christopher W. Proctor and Collin S. Roesler
New insights on obtaining phytoplankton concentration and composition from in situ multispectral Chlorophyll fluorescence
2010, 8:695-708
Abstract | PDF (Open Access)

Please Note

Articles are added to the Table of Contents throughout the year. The month of publication is shown as a convenient guide to locating the most recent articles. Open Access articles are freely available for download. Other articles require an institutional or individual subscription.

Quicklinks

Volume 1, 2003
Volume 2, 2004
Volume 3, 2005
Volume 4, 2006
Volume 5, 2007
Volume 6, 2008
Volume 7, 2009
Volume 8, 2010
Volume 9, 2011
Volume 10, 2012
Volume 11, 2013
Volume 12, 2014
Intercalibration Special Issue