SS4.02 Ecology and Physiology of Marine Organisms: Insights from Genes, Genomes, and Proteomes
Session Organizer(s):
Bethany, D. Jenkins
University of California Santa Cruz
bjenkins@es.ucsc.edu
Jackie, L. Collier
Marine Science Tesearch Center,SUNY Stony Brook
jcollier@notes.cc.sunysb.edu
If your abstract is listed without a time, your abstract has been selected as a poster presentation. Please click on the title of your abstract to see the date at which your poster will be presented.
Date: Wednesday, February 18, 2004
Location: 316 C
10:15 AM
Armbrust, E V
DIATOM GENOME PROJECT: NEW INSIGHTS INTO DIATOM PHYSIOLOGY AND ECOLOGY
10:45 AM
Hildebrand, M
CLONING AND FUNCTIONAL CHARACTERIZATION OF DIATOM AMMONIUM TRANSPORTERS
11:00 AM
Takabayashi, M
; Griffin, G A
; Barada, L P
; Wilkerson, F P
APPLICATION OF REAL-TIME PCR TO STUDY THE ENVIRONMENTAL REGULATION OF GENE EXPRESSION OF NITROGEN ASSIMILATION IN DIATOMS
11:15 AM
Davis, A K
; Hildebrand, M
; Palenik, B
CHARACTERIZATION OF A CELL-SURFACE PROTEIN ASSOCIATED WITH THE GIRDLE BAND REGION OF THE DIATOM THALASSIOSIRA PSEUDONANA
11:30 AM
Boissonneault, K R
; Bates, S S
; Milton, S
; Pelletier, J
; Housman, D
GENE EXPRESSION PROFILING IN THE TOXIC MARINE DIATOM PSEUDO-NITZSCHIA MULTISERIES USING MICROARRAY TECHNOLOGY
11:45 AM
Rynearson, T A
; Armbrust, E V
SPRINGTIME SUCCESSION OF PLANKTONIC DIATOM BLOOMS: SAME SPECIES, DIFFERENT POPULATIONS?
1:30 PM
Schoenfeld, T
; Godiska, R
; Rohwer, F
; Sheets, L
; Patterson, M
; Mead, D
SINGLE CELL GENOMICS OF HYPERTHERMOPHILES
1:45 PM
Foster, R A
; Carpenter, E J
; Bergman, B
A PHYLOGENETIC AND ULTRASTRUCTURAL CHARACTERIZATION OF THE CYANOBACTERIAL PASSENGERS IN AN UNKNOWN TINTINNID SP. AND A SPONGIOSE RADIOLARIAN, DICTYOCORYNE SP.
2:00 PM
Mann, E L
; Barbeau, K A
; Haygood, M G
BACTERIA ASSOCIATED WITH TRICHODESMIUM COLONIES: PHYLOGENETIC DIVERSITY AND POTENTIAL ROLE IN IRON ACQUISITION
2:15 PM
Olsen, L M
; Ozturk, M
; Vadstein, O
; Sakshaug, E
; Johnsen, G
INTERACTIONS BETWEEN METABOLISM, GEOCHEMISTRY AND BACTERIAL DIVERSITY IN CULTURES OF THE MARINE DINOFLAGELLATE PROROCENTRUM MINIMUM
2:30 PM
Blankenship, R E
; Lince, M T
; Lang, A S
; Plumley, F G
; Overmann, J
; Van Dover, C L
; Beatty, J T
A NEW PHOTOSYNTHETIC GREEN SULFUR BACTERIUM ISOLATED FROM DEEP-SEA HYDROTHERMAL VENTS
2:45 PM
Hofmann, G E
USING MOLECULAR APPROACHES TO EXAMINE SPECIES’ PHYSIOLOGICAL RESPONSE TO CHANGES IN ENVIRONMENTAL TEMPERATURE
3:30 PM
Voznesensky, M
; Lenz, P H
; Spanings-Pierrot, C
; Towle, D W
INDUCTION OF HEAT SHOCK PROTEIN 70 MRNA BY THERMAL STRESS IN CALANUS FINMARCHICUS
3:45 PM
Simoniello, C
; Torres, J J
; Somero, G N
KINETIC PROPERTIES AND THERMAL STABILITIES OF A4_LACTATE DEHYDROGENASES OF MESOPELAGIC FISHES EVOLVED TO DIFFERENT THERMAL GRADIENTS
4:00 PM
Speekmann, C L
; Buskey, E J
EFFECTS OF ENVIRONMENTAL CONDITIONS ON RNA:DNA RATIO ANALYSIS OF ZOOPLANKTON
4:15 PM
Puebla, O
; Sévigny, J M
; Sainte-Marie, B
; Brêthes, J C
POPULATION GENETIC STRUCTURE OF THE SNOW CRAB (CHIONOECETES OPILIO) AT THE NORTHWEST ATLANTIC SCALE: A CASE OF HIGH MARINE CONNECTIVITY
4:30 PM
Dawson, M N
PERIPATRIC SPECIATION AND EVOLUTIONARY RADIATION OF MASTIGIAS (SCYPHOZOA) IN MARINE LAKES DURING THE HOLOCENE: AN ISLAND BIOGEOGRAPHY FOR THE SEAS?
Date: Thursday, February 19, 2004
Location: 316 C
10:15 AM
Palenik, B
; Brahamsha, B
; McCarren, J
ECOLOGICAL INSIGHTS FROM GENETICS AND GENOMICS
10:45 AM
Hess, W R
; Steglich, C
; Frankenberg, N
THE MINIMAL GENOME FOR PHOTOSYNTHESIS: ON THE FUNCTION OF PHYCOERYTHRIN IN PROCHLOROCOCCUS
11:00 AM
Rocap, G
; McKay, J F
; Ahlgren, N A
GENETIC DIVERSITY IN FIELD POPULATIONS OF PROCHLOROCOCCUS AND SYNECHOCOCCUS
11:15 AM
Zinser, E R
; Coe, A
; Johnson, Z
; Chisholm, S W
A QUANTITATIVE PCR ASSESSMENT OF THE POPULATION STRUCTURE AND DYNAMICS OF THE MARINE CYANOBACTERIUM, PROCHLOROCOCCUS, IN THE NORTH ATLANTIC OCEAN
11:30 AM
Ahlgren, N A
; Hook, H E
; Rocap, G
A NOVEL CLADE OF MARINE SYNECHOCOCCUS DEFICIENT IN NITRATE UTILIZATION
11:45 AM
Jenkins, B D
; Gibson, A
; Campbell, L
; Wilkerson, F P
; Zehr, J P
DIVERSITY OF NITROGEN ASSIMILATION GENES IN NATURAL CYANOBACTERIAL POPULATIONS
1:30 PM
Proctor, L M
; Peglar, M
COMPARISON OF N CYCLING GUILDS IN MICROBIAL BIOFILM COMMUNITIES FROM VEGETATED AND NONVEGETATED ESTUARINE ENVIRONMENTS.
1:45 PM
Church, M J
; Jenkins, B D
; Karl, D M
; Short, S M
; Omoregie, E O
; Zehr, J P
DIVERSITY AND VERTICAL DISTRIBUTIONS OF NITROGEN-FIXING BACTERIA IN THE OLIGOTROPHIC NORTH PACIFIC OCEAN
2:00 PM
Short, S M
; Jenkins, B D
; Zehr, J P
NITROGENASE GENE EXPRESSION IN THE CHESAPEAKE BAY
2:15 PM
Francis, C A
; Ward, B B
DIVERSITY OF NITRITE REDUCTASE GENES IN THE WATER COLUMN OF PERMANENTLY ICE-COVERED LAKE BONNEY, ANTARCTICA
2:30 PM
Dyhrman, S T
; Webb, E A
; Orchard, E
PHOSPHORUS SCAVENGING MECHANISMS IN TRICHODESMIUM
2:45 PM
Williams, H N
; Stine, O C
; Sahaniuk, G E
; Pineiro, S A
DISTRIBUTION OF DIVERSE GENOTYPES OF HALOPHILIC BDELLOVIBRIONACEAE IN OCEANS, SEAS, ESTUARIES AND A SALT LAKE
3:30 PM
Lever, M A
; Teske, A
VERTICAL DISTRIBUTION OF METHANOGEN COMMUNITIES IN ORGANIC-RICH SUBSURFACE SEDIMENTS OF THE PERU TRENCH
3:45 PM
Klepac-Ceraj, V
; Polz, M
HIGH OVERALL DIVERSITY AND DOMINANCE OF MICRODIVERSITY AMONG CO-EXISTING SALT-MARSH SULFATE REDUCERS
4:00 PM
Lovejoy, C
; Massana, R
; Pedrós-Alió, C
; Carmack, E
; Vincent, W F
MOLECULAR BIODIVERSITY OF PICO-EUKARYOTES IN THE ARCTIC OCEAN
4:15 PM
Wieneke, S G
; Armbrust, E V
; Olson, R J
; McGillicuddy, D J
DIVERSITY OF EUKARYOTIC NANOPLANKTON IN SARGASSO SEA EDDIES
4:30 PM
Zhang, H
; Hou, Y
; Miranda, L
; Lin, S
SPATIAL AND SEASONAL VARIATION IN DINOFLAGELLATE DIVERSITY IN LONG ISLAND SOUND ANALYZED WITH MITOCHONDRIAL CYTOCHROME B
Date: Friday, February 20, 2004
Location: 316 C
8:30 AM
Karl, D M
A NOVEL, EMERGENT PARADIGM FOR THE ECOLOGY OF MARINE PICOPLANKTON
8:45 AM
Simu, K M
; Hagström, Å F
OLIGOTROPHIC BACTERIOPLANKTON WITH A NOVEL SINGLE-CELL LIFE STRATEGY.
9:00 AM
Kolber, Z S
; Haffa, A
; Koblizek, M
; Klimov, D
EFFICIENCY OF PHOTOSYNTHETIC LIGHT UTILIZATION IN AEROBIC ANOXYGENIC PHOTOHETEROTROPHS (AAPS)
9:15 AM
Goericke, R
THE ABUNDANCE AND DISTRIBUTION OF BACCHL A IN THE TEMPERATE, SUBTROPICAL AND TROPICAL PACIFIC.
9:30 AM
Waidner, L A
; Cottrell, M T
; Kirchman, D L
UNIQUE ANOXYGENIC PHOTOSYNTHESIS GENES AND OPERONS IN UNCULTURED BACTERIA IN THE DELAWARE ESTUARY
10:15 AM
Sieracki, M E
; Gilg, I C
; Thier, E C
; Poulton, N J
DISTRIBUTIONS OF AEROBIC, ANOXYGENIC PHOTOHETEROTROPHIC BACTERIA CELLS AND BIOMASS IN THE NORTHWEST ATLANTIC OCEAN
10:30 AM
Fuhrman, J A
; Hewson, I
; Schwalbach, M
; Brown, M
TEMPORAL AND GEOGRAPHIC PATTERNS OF MARINE BACTERIAL COMMUNITY COMPOSITION
10:45 AM
Thompson, J R
; Randa, M A
; Marcelino, L A
; Tomita-Mitchell, A
; Lim, E
; Polz, M F
DIVERSITY AND DYNAMICS OF A NORTH ATLANTIC COASTAL VIBRIO COMMUNITY
11:00 AM
Wommack, K E
; Chen, F
DIVERSITY AND COMMUNITY COMPOSITION OF VIRIOPLANTKTON OVER AN ANNUAL BIOLOGIAL CYCLE OF THE CHESAPEAKE BAY.
11:15 AM
Malmstrom , R R
; Kiene, R P
; Cottrell, M T
; Kirchman, D L
CONTRIBUTION OF SAR11 BACTERIA TO DISSOLVED ORGANIC MATTER FLUX IN THE NORTH ATLANTIC OCEAN
11:30 AM
Teira, E
; Herndl, G J
UPTAKE OF D- VS. L- AMINO ACIDS BY THE MAIN PROKARYOTES IN THE MESO- AND BATHYPELAGIC WATERS OF THE NORTH ATLANTIC
11:45 AM
Evans, C T
; Van Mooy, B
; Keil, R G
; Greengrove, C
; Chin-Leo, G
ISOLATION OF DNA FROM ACTIVELY GROWING HETEROTROPHIC BACTERIA USING 5-BROMO-2′-DEOXYURIDINE (BRDU)
Date: T,W,Th, February 17-19, 2004
Location: Kamehameha Hall III
11:45 AM
Dollhopf, S L
; Smith, A C
; Hunter, E
; Kostka, J E
QUANTIFICATION OF SULFATE- AND IRON(III)-REDUCING BACTERIA WITH REVERSE TRANSCRIPTION REAL-TIME PCR IN BIOTURBATED AND NONBIOTURBATED SALTMARSH SEDIMENTS
11:45 AM
Shoemaker, D J
; von Dassow, P
; Latz, M I
; Moline, M A
LIGHT AND TIME-SENSITIVE REGULATION OF BIOLUMINESCENCE IN THE DINOFLAGELLATE LINGULODINIUM POLYEDRUM.
11:45 AM
Cesar, D E
; Cottrell, M T
; Kirchman, D
CARBON LIMITATION OF BACTERIAL PRODUCTION IN DELAWARE BAY
11:45 AM
Chistoserdov, A Y
; Madrid, V M
; Aller, J Y
; Aller, R C
PHYLOGENETIC DIVERSITY OF RIBULOSE-1,5-BIPHOSPHATE CARBOXYLASE/OXYGENASE GENES OF MICROBIAL COMMUNITIES FROM MOBILE DELTAIC SEDIMENTS
11:45 AM
Madrid, V M
; Chistoserdov, A Y
; Aller, J Y
; Aller, R C
DISSIMILATORY SULFATE REDUCTION POTENTIAL OF PROKARYOTIC COMMUNITIES FROM MOBILE DELTAIC SEDIMENTS
11:45 AM
Lin, S
; Mulholland, M
; Zhang, H
; Carpenter, E J
MOLECULAR AND ECOLOGICAL CHARACTERIZATION OF THE PFIESTERIA-LIKE DINOFLAGELLATE CRYPTOPERIDINIOPSIS SP
11:45 AM
Soltysiak, K A
; Patton, J C
; Gold, J R
; Campbell, L
MOLECULAR “FINGERPRINTS” USED TO IDENTIFY AND DIFFERENTIATE DINOFLAGELLATE SPECIES IN THE GULF OF MEXICO
11:45 AM
Longnecker, K
; Homen, D S
; Sherr, B F
; Sherr, E B
USING MICROFISH TO IDENTIFY BIOSYNTHETICALLY METABOLICALLY ACTIVE BACTERIOPLANKTON IN THE OREGON UPWELLING SYSTEM
11:45 AM
Kellogg, C A
; Stone, R P
A PILOT STUDY OF DEEP WATER CORAL MICROBIAL ECOLOGY
11:45 AM
Pascale, M
; Worden, A Z
; Zehr, J P
A PEPTIDE NUCLEIC ACID (PNA)-BASED FLUORESCENT IN SITU HYBRIDIZATION METHOD FOR WHOLE CELL DETECTION OF CROCOSPHAERA SP. (SYNECHOCYSTIS SP.) WH8501
11:45 AM
Yu, Y
; Rohwer, F
FASTGROUP II: A WEB-BASED BIOINFORMATICS PLATFORM FOR ANALYSES OF LARGE 16S RDNA LIBRARIES
11:45 AM
Pace, D A
; Ginsburg, D W
; Manahan, D T
MOLECULAR PHYSIOLOGICAL BASES OF HIGH GROWTH EFFICIENCY IN INVERTEBRATE LARVAE FROM COLD ENVIRONMENTS
11:45 AM
Ginsburg, D W
; Manahan, D T
NUTRITIONAL STATUS OF INVERTEBRATE LARVAE IN THE OCEAN
11:45 AM
Jeffrey, W H
; Meador, J D
; Pakulski, J D
; Douki, T A
; Baldwin, A J
; Mitchell, D L
SOLAR INDUCED DNA PHOTOPRODUCTS ACROSS A LATITUDINAL GRADIENT IN THE EASTERN PACIFIC OCEAN
11:45 AM
Bibby, T S
; Mary, I
; Nield, J
; Partensky, F
; Barber, J
LOW-LIGHT-ADAPTED PROCHLOROCOCCUS SPECIES POSSESS SPECIFIC ANTENNA FOR EACH PHOTOSYSTEM
11:45 AM
Collier, J L
; Baker, K M
UREA-DEGRADING MICROORGANISMS IN CHESAPEAKE BAY
11:45 AM
McFadden, M A
; Cowles, D L
BLOOD AND TISSUE CHARACTERISTICS OF HEMISQUILLA CALIFORNIENSIS (CRUSTACEA: STOMATOPODA), A BURROW-DWELLING MANTIS SHRIMP WHICH ROUTINELY ENCOUNTERS HYPOXIA
11:45 AM
Dantzler, M M
; Kemp, P F
; Aller, J Y
; Dhadwal, H S
ADVANCEMENTS IN THE USE OF A NUCLEIC ACID HYBRIDIZATION BASED CAPILLARY WAVEGUIDE BIOSENSOR FOR MARINE MICROBIAL PROCESS STUDIES
11:45 AM
Erdner, D L
; Anderson, D M
GLOBAL GENE EXPRESSION ANALYSIS OF NITROGEN AND PHOSPHORUS STRESS IN THE TOXIC DINOFLAGELLATE ALEXANDRIUM FUNDYENSE
11:45 AM
Miranda, L N
; Zhang, H
; Hargraves, P
; Lin, S
PHYTOPLANKTON DIVERSITY ALONG THE EASTERN-WESTERN NUTRIENT GRADIENT IN LONG ISLAND SOUND: TAXONOMIC AND PHYLOGENETIC APPROACHES
11:45 AM
Green, A J
; Manahan, D T
HIGH GROWTH EFFICIENCIES IN ANTARCTIC LARVAE
11:45 AM
Yu, P C
; Moran, A L
; Manahan, D T
GENETIC VARIATION IN SURVIVAL AND GROWTH RECOVERY FOLLOWING PROLONGED STARVATION OF INVERTEBRATE LARVAE
11:45 AM
Lam, P
; Cowen, J P
; Jones, R D
; Popp, B N
; Teske, A
MOLECULAR ANALYSES OF AUTOTROPHIC AMMONIA-OXIDIZING BACTERIA IN DEEP-SEA HYDROTHERMAL VENTS ENVIRONMENTS
11:45 AM
Hagman, K
; Simu, K
; Riemann, L
; Hagström, Å
OPTIMIZATION OF DNA EXTRACTION FOR QUANTITATIVE MARINE BACTERIOPLANKTON COMMUNITY ANALYSIS.
11:45 AM
Simu Karin, M
; Hahström Åke, F K
ABUNDANT SLOW GROWING OLIGOTROPHIC BACTERIOPLANKTON SHOW LOW VIABILITY IN DILUTION CULTURES
11:45 AM
Lauer, A
; Teske, A
ARCHAEAL DIVERSITY IN A DEEP SEA SEDIMENT OF THE AEQUATORIAL PACIFIC OCEAN BASED ON 16S RDNA ANALYSES
11:45 AM
Wolfe, F L
; Schofield, O M
; Falkowski, P G
THE DIVERSE MOLECULAR EVOLUTION OF IRON AND MANGANESE SUPEROXIDE DISMUTASES IN OXYGENIC PHOTOAUTOTROPHS
11:45 AM
Sorensen, K B
; Teske, A
ARCHAEAL PHYLOTYPES IN A METAL-RICH, LOW-ACTIVITY DEEP SUBSURFACE SEDIMENT OF THE PERU BASIN (ODP LEG 201, SITE 1231)
11:45 AM
Horak, R E
; Forsyth, M H
; Van Dover, C L
LIGHT PRODUCTION BY SULFIDE-OXIDIZING BACTERIA? A POSSIBLE LIGHT SOURCE FOR CHLOROPLAST-SEQUESTERING FORAMINIFERANS
11:45 AM
Wisniewski, R J
; Dyhrman, S T
; Moffett, J W
THE EFFECT OF METAL SUPPLY ON ALKALINE PHOSPHATASE ACTIVITY IN CULTURES OF EMILIANIA HUXLEYI
11:45 AM
Flores, J F
; Carney, S L
; Schaeffer, S W
; Fisher, C R
PHYSIOLOGICAL AND GENETIC CHARACTERIZATION OF HEMOGLOBIN IN A PHENOTYPICALLY PLASTIC HYDROTHERMAL VENT TUBEWORM
11:45 AM
Jiao, N Z
; Zhang, Y
DYNAMICS OF AEROBIC ANOXYENIC PHOTOTROPHIC BACTERIA IN THE EAST CHINA SEA
11:45 AM
Brown, M V
; Fuhrman, J A
TRACKING TEMPORAL PATTERNS OF MOLECULAR BIODIVERSITY, MICRODIVERSITY AND COMMUNITY STRUCTURE AT VARIOUS DEPTHS IN THE SAN PEDRO CHANNEL, CALIFORNIA.
11:45 AM
Manahan, D T
; Meyer, E
; Haag, A
; Von Dippe, P
; Hedgecock, D
GENOMIC STUDY OF THE PHYSIOLOGICAL BASES OF DIFFERENTIAL GROWTH IN INVERTEBRATE LARVAE
11:45 AM
Moore, M
; Manahan, D T
LIPID METABOLISM IN INVERTEBRATE LARVAE: ISSUES WITH ACCURACY AND INTERPRETAIONS
11:45 AM
Thamatrakoln, K
; Hildebrand, M
ISOLATING NEW SILICIC ACID TRANSPORTERS FROM DIATOMS FOR COMPARATIVE SEQUENCE ANALYSIS
11:45 AM
Robidart, J C
; Campbell, B J
; Cary, S C
; Felbeck, H
TEMPERATURE TOLERANCE OF THE UNCULTURED SYMBIOTIC COMMUNITY OF THE VENT POLYCHAETE, ALVINELLA POMPEJANA, AS INFERRED FROM STABILITIES OF MALATE DEHYDROGENASES
11:45 AM
Haffa, A L
; Klimov, D
; Kolber, Z
DEVELOPMENT OF AN OXYGEN SENSOR BASED ON QUENCHING OF PORPHYRIN PHOSPHORESCENCE
11:45 AM
Hou, Y
; Lin, S
ANALYSIS OF DIFFERENTIALLY EXPRESSED PROTEINS IN PFIESTERIA PISCICIDA IN SEARCH OF GROWTH-RELATED PROTEINS
11:45 AM
Tartarotti, B
; Torres, J J
INDUCTION OF STRESS PROTEINS IN THE COPEPOD ACARTIA TONSA
11:45 AM
Robertson, D L
; Gershenovich, M
GLUTAMINE SYNTHETASE ISOENZYME EXPRESSION IN THE MARINE DIATOM SKELETONEMA COSTATUM
11:45 AM
Murphy, J L
; Savill, M G
; Sobsey, M D
COMPARISON OF STANDARD AND MOLECULAR METHODS FOR CAMPYLOBACTER IDENTIFICATION AND ENVIRONMENTAL SOURCE IDENTIFICATION
11:45 AM
Huang, B Q
; Chen, J X
; Jiao, N Z
; Hong, J S
; Chen, F
FLUORESCENT IN SITU HYBRIDIZATION WITH OLIGONUCLEOTIDE PROBES TO IDENTIFY ALEXANDRIUM TAMARENSE AND GENUS ALEXANDRIUM
11:45 AM
Short, C M
; Church, M J
; Montoya, J P
; Zehr, J P
TEMPORAL VARIABILITY IN NITROGENASE GENE (NIFH) EXPRESSION IN THE SUPTROPICAL NORTH PACIFIC OCEAN
11:45 AM
Poulton, N J
; Gilg, I C
; Thier, E C
; Sieracki, M E
DISCRIMINATION BETWEEN CTC-ACTIVE BACTERIA AND PROCHLOROCOCCUS FROM NATURAL SAMPLES USING DUAL BEAM FLOW CYTOMETRY
11:45 AM
Clarke , M A
; Balkwill, D
; Gragg, R
COMPARING IMPACT OF PHOTOOXIDIZED AND UNPHOTOOXIDIZED PETROLEUM ON MARINE BACTERIA COMMUNITIES USING TERMINAL RESTRICTION FRAGMENT LENGTH POLYMORPHISM
11:45 AM
Chin-Leo, G
; Keil, R G
; Greengrove, C
; Evans, C T
BACTERIOPLANKTON DYNAMICS IN INTERMITTENTLY ANOXIC FJORDS OF VANCOUVER ISLAND, BRITISH COLUMBIA
11:45 AM
Gobler, C J
; Pererya, G
; Downes-Gastrich, M
; Anderson, O R
; Wilhelm, S W
CHARACTERIZATION OF VIRUSES ISOLATED FROM NEW YORK ESTUARIES CAPABLE OF LYSING THE HARMFUL BROWN TIDE ALGA, AUREOCOCCUS ANOPHAGEFFERENS
|